TPDB

3D PDB MODEL

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TPDB ID TPDB28444

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 32-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

ASNWNTRIAYIGCCDIPDCYNKNREQCLDESS

FASTA

>TPDB28444|Toxicity|length=32
ASNWNTRIAYIGCCDIPDCYNKNREQCLDESS

Formula C152H233N45O54S4

Absent Amino Acids HMFV

Common Amino Acids NC

Mass 3683.03

PI 4.20

Basic Residues 3

Acidic Residues 5

Hydrophobic Residues 9

Net Charge -2

Boman Index 7.07

Hydrophobicity -0.800

Aliphatic Index 55.00

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8730

Absorbance 280nm 237.03

Polar Residues 15

number

2

A

2

R

4

N

3

D

4

C

2

E

1

Q

1

G

0

H

3

I

1

L

1

K

0

M

0

F

1

P

3

S

1

T

1

W

2

Y

0

V

Amino Acid Distribution

A: 2 R: 2 N: 4 D: 3 C: 4 E: 2 Q: 1 G: 1 H: 0 I: 3 L: 1 K: 1 M: 0 F: 0 P: 1 S: 3 T: 1 W: 1 Y: 2 V: 0

Length

32

Formula

C152H233N45O54S4

Mass

3683.03

PI

4.20

Net Charge

-2

Boman Index

7.07

Hydrophobicity

-0.800

Evidence 1 Activity

Source & Reference

Database Source NA