TPDB

3D PDB MODEL

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TPDB ID TPDB28439

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 31-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

ASRLNKSCHLGGEYCGLFEVCCYGDCFIMCW

FASTA

>TPDB28439|Toxicity|length=31
ASRLNKSCHLGGEYCGLFEVCCYGDCFIMCW

Formula C152H223N39O43S7

Absent Amino Acids QPT

Common Amino Acids C

Mass 3509.10

PI 5.34

Basic Residues 3

Acidic Residues 3

Hydrophobic Residues 12

Net Charge -1

Boman Index -1.00

Hydrophobicity 0.390

Aliphatic Index 62.90

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8855

Absorbance 280nm 252.34

Polar Residues 11

number

1

A

1

R

1

N

1

D

6

C

2

E

0

Q

4

G

1

H

1

I

3

L

1

K

1

M

2

F

0

P

2

S

0

T

1

W

2

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 1 C: 6 E: 2 Q: 0 G: 4 H: 1 I: 1 L: 3 K: 1 M: 1 F: 2 P: 0 S: 2 T: 0 W: 1 Y: 2 V: 1

Length

31

Formula

C152H223N39O43S7

Mass

3509.10

PI

5.34

Net Charge

-1

Boman Index

-1.00

Hydrophobicity

0.390

Evidence 1 Activity

Source & Reference

Database Source NA