TPDB

3D PDB MODEL

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TPDB ID TPDB28322

Activity

Hemolysis Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Hemolytic2 Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural multi-activity (Hemolysis and Toxicity) peptide sequence curated from Hemolytic2, Peptipedia, and ToxinPred 3.0, with an available 3D structural model.

Sequence

ANKRPVWIMGHMVNAVYQIDEFVNLGANSIDTDVS

FASTA

>TPDB28322|Hemolysis;Toxicity|length=35
ANKRPVWIMGHMVNAVYQIDEFVNLGANSIDTDVS

Formula C172H267N47O53S2

Absent Amino Acids C

Common Amino Acids V

Mass 3905.42

PI 4.44

Basic Residues 3

Acidic Residues 4

Hydrophobic Residues 17

Net Charge -2

Boman Index 5.57

Hydrophobicity 0.009

Aliphatic Index 94.57

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 178.98

Polar Residues 9

number

3

A

1

R

4

N

3

D

0

C

1

E

1

Q

2

G

1

H

3

I

1

L

1

K

2

M

1

F

1

P

2

S

1

T

1

W

1

Y

5

V

Amino Acid Distribution

A: 3 R: 1 N: 4 D: 3 C: 0 E: 1 Q: 1 G: 2 H: 1 I: 3 L: 1 K: 1 M: 2 F: 1 P: 1 S: 2 T: 1 W: 1 Y: 1 V: 5

Length

35

Formula

C172H267N47O53S2

Mass

3905.42

PI

4.44

Net Charge

-2

Boman Index

5.57

Hydrophobicity

0.009

Evidence 1 Activity

Source & Reference

Database Source NA