TPDB

3D PDB MODEL

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TPDB ID TPDB28301

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 47-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ALLSCRCEGKTEYGDKWLFHGGCPNNYGYNYKCFMKPGAVCCYPQNZ

FASTA

>TPDB28301|Toxicity|length=47
ALLSCRCEGKTEYGDKWLFHGGCPNNYGYNYKCFMKPGAVCCYPQNZ

Formula C231H335N61O65S7

Absent Amino Acids I

Common Amino Acids CG

Mass 5230.99

PI 8.01

Basic Residues 6

Acidic Residues 3

Hydrophobic Residues 15

Net Charge +2

Boman Index 2.51

Hydrophobicity -0.547

Aliphatic Index 35.32

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 13325

Absorbance 280nm 254.73

Polar Residues 18

number

2

A

1

R

4

N

1

D

6

C

2

E

1

Q

6

G

1

H

0

I

3

L

4

K

1

M

2

F

3

P

1

S

1

T

1

W

5

Y

1

V

Amino Acid Distribution

A: 2 R: 1 N: 4 D: 1 C: 6 E: 2 Q: 1 G: 6 H: 1 I: 0 L: 3 K: 4 M: 1 F: 2 P: 3 S: 1 T: 1 W: 1 Y: 5 V: 1

Length

47

Formula

C231H335N61O65S7

Mass

5230.99

PI

8.01

Net Charge

+2

Boman Index

2.51

Hydrophobicity

-0.547

Evidence 1 Activity

Source & Reference

Database Source NA