TPDB

3D PDB MODEL

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TPDB ID TPDB28204

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 59-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

AFLVVTLLLFTATATTGAANRVNAAANGKASDSISLAVRDDCCPDPACRQNHPELCSSG

FASTA

>TPDB28204|Toxicity|length=59
AFLVVTLLLFTATATTGAANRVNAAANGKASDSISLAVRDDCCPDPACRQNHPELCSSG

Formula C253H412N76O85S4

Absent Amino Acids MWY

Common Amino Acids A

Mass 6006.75

PI 5.37

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 24

Net Charge -1

Boman Index 7.83

Hydrophobicity 0.176

Aliphatic Index 84.58

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 250

Absorbance 280nm 4.16

Polar Residues 19

number

11

A

3

R

4

N

4

D

4

C

1

E

1

Q

3

G

1

H

1

I

6

L

1

K

0

M

2

F

3

P

5

S

5

T

0

W

0

Y

4

V

Amino Acid Distribution

A: 11 R: 3 N: 4 D: 4 C: 4 E: 1 Q: 1 G: 3 H: 1 I: 1 L: 6 K: 1 M: 0 F: 2 P: 3 S: 5 T: 5 W: 0 Y: 0 V: 4

Length

59

Formula

C253H412N76O85S4

Mass

6006.75

PI

5.37

Net Charge

-1

Boman Index

7.83

Hydrophobicity

0.176

Evidence 1 Activity

Source & Reference

Database Source NA