TPDB

3D PDB MODEL

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TPDB ID TPDB28069

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 44-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ACAGLYKKCGKGVNTCCENRPCKCDLAMGNCICKKKFVEFFGGZ

FASTA

>TPDB28069|Toxicity|length=44
ACAGLYKKCGKGVNTCCENRPCKCDLAMGNCICKKKFVEFFGGZ

Formula C197H318N56O55S9

Absent Amino Acids QHSW

Common Amino Acids C

Mass 4639.57

PI 8.51

Basic Residues 8

Acidic Residues 3

Hydrophobic Residues 13

Net Charge +5

Boman Index 6.64

Hydrophobicity -0.059

Aliphatic Index 46.59

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1990

Absorbance 280nm 42.89

Polar Residues 13

number

3

A

1

R

3

N

1

D

8

C

2

E

0

Q

6

G

0

H

1

I

2

L

7

K

1

M

3

F

1

P

0

S

1

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 3 R: 1 N: 3 D: 1 C: 8 E: 2 Q: 0 G: 6 H: 0 I: 1 L: 2 K: 7 M: 1 F: 3 P: 1 S: 0 T: 1 W: 0 Y: 1 V: 2

Length

44

Formula

C197H318N56O55S9

Mass

4639.57

PI

8.51

Net Charge

+5

Boman Index

6.64

Hydrophobicity

-0.059

Evidence 1 Activity

Source & Reference

Database Source NA