TPDB

3D PDB MODEL

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TPDB ID TPDB27986

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 32-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

AANNKATDLMALTVRGCCGNPSCSIHIPYVCN

FASTA

>TPDB27986|Toxicity|length=32
AANNKATDLMALTVRGCCGNPSCSIHIPYVCN

Formula C138H226N42O44S5

Absent Amino Acids EQFW

Common Amino Acids ANC

Mass 3337.87

PI 7.85

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 12

Net Charge +1

Boman Index 2.72

Hydrophobicity 0.209

Aliphatic Index 79.38

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1740

Absorbance 280nm 52.13

Polar Residues 13

number

4

A

1

R

4

N

1

D

4

C

0

E

0

Q

2

G

1

H

2

I

2

L

1

K

1

M

0

F

2

P

2

S

2

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 4 R: 1 N: 4 D: 1 C: 4 E: 0 Q: 0 G: 2 H: 1 I: 2 L: 2 K: 1 M: 1 F: 0 P: 2 S: 2 T: 2 W: 0 Y: 1 V: 2

Length

32

Formula

C138H226N42O44S5

Mass

3337.87

PI

7.85

Net Charge

+1

Boman Index

2.72

Hydrophobicity

0.209

Evidence 1 Activity

Source & Reference

Database Source NA