TPDB

3D PDB MODEL

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TPDB ID TPDB27545

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 36-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

YTSLIHSLIEEGQNQQEKNEQELLELDKWASLWNWF

FASTA

>TPDB27545|Antibacterial;Antiviral|length=36
YTSLIHSLIEEGQNQQEKNEQELLELDKWASLWNWF

Formula C201H296N50O63

Absent Amino Acids RCMPV

Common Amino Acids EL

Mass 4420.86

PI 4.07

Basic Residues 3

Acidic Residues 7

Hydrophobic Residues 14

Net Charge -5

Boman Index 8.64

Hydrophobicity -0.864

Aliphatic Index 89.44

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 17990

Absorbance 280nm 406.93

Polar Residues 12

number

1

A

0

R

3

N

1

D

0

C

6

E

4

Q

1

G

1

H

2

I

6

L

2

K

0

M

1

F

0

P

3

S

1

T

3

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 3 D: 1 C: 0 E: 6 Q: 4 G: 1 H: 1 I: 2 L: 6 K: 2 M: 0 F: 1 P: 0 S: 3 T: 1 W: 3 Y: 1 V: 0

Length

36

Formula

C201H296N50O63

Mass

4420.86

PI

4.07

Net Charge

-5

Boman Index

8.64

Hydrophobicity

-0.864

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0