TPDB

3D PDB MODEL

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TPDB ID TPDB27246

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

WVNQLAVLGLPAVDAAVA

FASTA

>TPDB27246|Antibacterial;Antiviral|length=18
WVNQLAVLGLPAVDAAVA

Formula C84H135N21O23

Absent Amino Acids RCEHIKMFSTY

Common Amino Acids A

Mass 1807.12

PI 3.10

Basic Residues 0

Acidic Residues 1

Hydrophobic Residues 13

Net Charge -1

Boman Index -1.41

Hydrophobicity 1.322

Aliphatic Index 157.22

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 304.35

Polar Residues 2

number

5

A

0

R

1

N

1

D

0

C

0

E

1

Q

1

G

0

H

0

I

3

L

0

K

0

M

0

F

1

P

0

S

0

T

1

W

0

Y

4

V

Amino Acid Distribution

A: 5 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 3 K: 0 M: 0 F: 0 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 4

Length

18

Formula

C84H135N21O23

Mass

1807.12

PI

3.10

Net Charge

-1

Boman Index

-1.41

Hydrophobicity

1.322

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0