TPDB

3D PDB MODEL

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TPDB ID TPDB26743

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

WVRLGRYLLRRLKTPFTR

FASTA

>TPDB26743|Antibacterial;Antiviral|length=18
WVRLGRYLLRRLKTPFTR

Formula C109H179N35O22

Absent Amino Acids ANDCEQHIMS

Common Amino Acids R

Mass 2331.84

PI 12.58

Basic Residues 6

Acidic Residues 0

Hydrophobic Residues 8

Net Charge +6

Boman Index -0.31

Hydrophobicity -0.544

Aliphatic Index 102.78

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 6990

Absorbance 280nm 299.76

Polar Residues 3

number

0

A

5

R

0

N

0

D

0

C

0

E

0

Q

1

G

0

H

0

I

4

L

1

K

0

M

1

F

1

P

0

S

2

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 4 K: 1 M: 0 F: 1 P: 1 S: 0 T: 2 W: 1 Y: 1 V: 1

Length

18

Formula

C109H179N35O22

Mass

2331.84

PI

12.58

Net Charge

+6

Boman Index

-0.31

Hydrophobicity

-0.544

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0