Back to search

Peptide record

TPDB26654

Antibacterial Antiviral standard
39 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB26654
Antibacterial Antiviral
Anti-infective peptides
Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0
standard
No
A 39-aa standard-residue multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.
Sequence
WQEWEQKITALLEQAQIQQEKNEYELQKLDKWASLWEWF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C233H338N56O67
RCGHMPV
EQ
4995.58
4.21
4
8
17
-4
1.94
-1.095
77.69
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
28990
5.80
11
Residue Composition
number
3
A
0
R
1
N
1
D
0
C
7
E
7
Q
0
G
0
H
2
I
5
L
4
K
0
M
1
F
0
P
1
S
1
T
5
W
1
Y
0
V
Amino Acid Distribution
A: 3 R: 0 N: 1 D: 1 C: 0 E: 7 Q: 7 G: 0 H: 0 I: 2 L: 5 K: 4 M: 0 F: 1 P: 0 S: 1 T: 1 W: 5 Y: 1 V: 0
Chemical Descriptors
39 reviewed residue count
C233H338N56O67 sequence-only estimate (linear, free termini)
4995.58 sequence-only estimate (linear, free termini)
4.21 sequence-only estimate (linear, free termini)
-4 sequence-only estimate (linear, free termini)
1.94 sequence-only estimate (linear, free termini)
-1.095 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0 DRAVP 2.0