TPDB

3D PDB MODEL

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TPDB ID TPDB26641

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

WNHGNITLGEWYNQTKDLQQKFYEIIMDIEQNNVQ

FASTA

>TPDB26641|Antibacterial;Antiviral|length=35
WNHGNITLGEWYNQTKDLQQKFYEIIMDIEQNNVQ

Formula C193H285N51O60S1

Absent Amino Acids ARCPS

Common Amino Acids NQ

Mass 4311.75

PI 4.28

Basic Residues 3

Acidic Residues 5

Hydrophobic Residues 13

Net Charge -3

Boman Index 7.53

Hydrophobicity -1.017

Aliphatic Index 75.14

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 13980

Absorbance 280nm 324.23

Polar Residues 14

number

0

A

0

R

5

N

2

D

0

C

3

E

5

Q

2

G

1

H

4

I

2

L

2

K

1

M

1

F

0

P

0

S

2

T

2

W

2

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 5 D: 2 C: 0 E: 3 Q: 5 G: 2 H: 1 I: 4 L: 2 K: 2 M: 1 F: 1 P: 0 S: 0 T: 2 W: 2 Y: 2 V: 1

Length

35

Formula

C193H285N51O60S1

Mass

4311.75

PI

4.28

Net Charge

-3

Boman Index

7.53

Hydrophobicity

-1.017

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0