TPDB

3D PDB MODEL

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TPDB ID TPDB26618

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAVP 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 35-aa modified multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, and DRAVP 2.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

WMEWDREINNYTSLIHSLIEESQNQQEKNEQELLX

FASTA

>TPDB26618|Antibacterial;Antiviral|length=35
WMEWDREINNYTSLIHSLIEESQNQQEKNEQELLX

Formula C184H280N50O64S1

Absent Amino Acids ACGFPV

Common Amino Acids E

Mass 4248.60

PI 3.98

Basic Residues 3

Acidic Residues 8

Hydrophobic Residues 11

Net Charge -6

Boman Index 14.62

Hydrophobicity -1.234

Aliphatic Index 78.00

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 12490

Absorbance 280nm 293.98

Polar Residues 13

number

0

A

1

R

4

N

1

D

0

C

7

E

4

Q

0

G

1

H

3

I

4

L

1

K

1

M

0

F

0

P

3

S

1

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 4 D: 1 C: 0 E: 7 Q: 4 G: 0 H: 1 I: 3 L: 4 K: 1 M: 1 F: 0 P: 0 S: 3 T: 1 W: 2 Y: 1 V: 0

Length

35

Formula

C184H280N50O64S1

Mass

4248.60

PI

3.98

Net Charge

-6

Boman Index

14.62

Hydrophobicity

-1.234

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0