Back to search

Peptide record

TPDB26612

Antibacterial Antiviral standard
36 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB26612
Antibacterial Antiviral
Anti-infective peptides
Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0
standard
No
A 36-aa standard-residue multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.
Sequence
WMEWDREIEEYTKKIEEYTKKIEEYTKKIEEYTKKI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C217H333N49O67S1
ANCQGHLFPSV
E
4732.38
4.88
9
11
12
-2
3.20
-1.656
54.17
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
16960
3.58
8
Residue Composition
number
0
A
1
R
0
N
1
D
0
C
10
E
0
Q
0
G
0
H
5
I
0
L
8
K
1
M
0
F
0
P
0
S
4
T
2
W
4
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 1 C: 0 E: 10 Q: 0 G: 0 H: 0 I: 5 L: 0 K: 8 M: 1 F: 0 P: 0 S: 0 T: 4 W: 2 Y: 4 V: 0
Chemical Descriptors
36 reviewed residue count
C217H333N49O67S1 sequence-only estimate (linear, free termini)
4732.38 sequence-only estimate (linear, free termini)
4.88 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
3.20 sequence-only estimate (linear, free termini)
-1.656 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0