TPDB

3D PDB MODEL

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TPDB ID TPDB26448

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAVP 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 29-aa modified multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, and DRAVP 2.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

WEQKITALLEQAQIQQEKNEYELQKLDKX

FASTA

>TPDB26448|Antibacterial;Antiviral|length=29
WEQKITALLEQAQIQQEKNEYELQKLDKX

Formula C153H246N40O50

Absent Amino Acids RCGHMFPSV

Common Amino Acids Q

Mass 3445.87

PI 4.50

Basic Residues 4

Acidic Residues 6

Hydrophobic Residues 10

Net Charge -2

Boman Index 13.34

Hydrophobicity -1.248

Aliphatic Index 87.59

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 6990

Absorbance 280nm 202.85

Polar Residues 9

number

2

A

0

R

1

N

1

D

0

C

5

E

6

Q

0

G

0

H

2

I

4

L

4

K

0

M

0

F

0

P

0

S

1

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 2 R: 0 N: 1 D: 1 C: 0 E: 5 Q: 6 G: 0 H: 0 I: 2 L: 4 K: 4 M: 0 F: 0 P: 0 S: 0 T: 1 W: 1 Y: 1 V: 0

Length

29

Formula

C153H246N40O50

Mass

3445.87

PI

4.50

Net Charge

-2

Boman Index

13.34

Hydrophobicity

-1.248

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0