TPDB

3D PDB MODEL

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TPDB ID TPDB26443

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAVP 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 26-aa modified multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, and DRAVP 2.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

WEQKIEELLKKAEEQQKKNEEELKKX

FASTA

>TPDB26443|Antibacterial;Antiviral|length=26
WEQKIEELLKKAEEQQKKNEEELKKX

Formula C139H231N37O46

Absent Amino Acids RDCGHMFPSTYV

Common Amino Acids E

Mass 3156.58

PI 5.10

Basic Residues 7

Acidic Residues 8

Hydrophobic Residues 6

Net Charge -1

Boman Index 21.24

Hydrophobicity -2.019

Aliphatic Index 63.85

Half Life

Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 174.24

Polar Residues 4

number

1

A

0

R

1

N

0

D

0

C

8

E

3

Q

0

G

0

H

1

I

3

L

7

K

0

M

0

F

0

P

0

S

0

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 0 C: 0 E: 8 Q: 3 G: 0 H: 0 I: 1 L: 3 K: 7 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 0

Length

26

Formula

C139H231N37O46

Mass

3156.58

PI

5.10

Net Charge

-1

Boman Index

21.24

Hydrophobicity

-2.019

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0