TPDB

3D PDB MODEL

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TPDB ID TPDB26328

Activity

Antibacterial Anticancer Antiviral

Activity_category_statistics

Anti-infective peptides Cancer-related peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 50-aa standard natural multi-activity (Antibacterial, Anticancer, and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

VVEQYNQTILNLTSEISTLENKSAELNYTVQKLQTLIDNINSTLVDLKWL

FASTA

>TPDB26328|Antibacterial;Anticancer;Antiviral|length=50
VVEQYNQTILNLTSEISTLENKSAELNYTVQKLQTLIDNINSTLVDLKWL

Formula C256H418N64O85

Absent Amino Acids RCGHMFP

Common Amino Acids L

Mass 5752.51

PI 4.13

Basic Residues 3

Acidic Residues 6

Hydrophobic Residues 21

Net Charge -3

Boman Index 9.81

Hydrophobicity -0.156

Aliphatic Index 126.60

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 147.41

Polar Residues 22

number

1

A

0

R

6

N

2

D

0

C

4

E

4

Q

0

G

0

H

4

I

9

L

3

K

0

M

0

F

0

P

4

S

6

T

1

W

2

Y

4

V

Amino Acid Distribution

A: 1 R: 0 N: 6 D: 2 C: 0 E: 4 Q: 4 G: 0 H: 0 I: 4 L: 9 K: 3 M: 0 F: 0 P: 0 S: 4 T: 6 W: 1 Y: 2 V: 4

Length

50

Formula

C256H418N64O85

Mass

5752.51

PI

4.13

Net Charge

-3

Boman Index

9.81

Hydrophobicity

-0.156

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0