TPDB

3D PDB MODEL

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TPDB ID TPDB26080

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

VELSEWGVPCATCILDRR

FASTA

>TPDB26080|Antibacterial;Antiviral|length=18
VELSEWGVPCATCILDRR

Formula C88H143N25O27S2

Absent Amino Acids NQHKMFY

Common Amino Acids RCELV

Mass 2047.37

PI 4.44

Basic Residues 2

Acidic Residues 3

Hydrophobic Residues 7

Net Charge -1

Boman Index 3.83

Hydrophobicity 0.189

Aliphatic Index 102.78

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5625

Absorbance 280nm 274.74

Polar Residues 4

number

1

A

2

R

0

N

1

D

2

C

2

E

0

Q

1

G

0

H

1

I

2

L

0

K

0

M

0

F

1

P

1

S

1

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 0 D: 1 C: 2 E: 2 Q: 0 G: 1 H: 0 I: 1 L: 2 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 1 Y: 0 V: 2

Length

18

Formula

C88H143N25O27S2

Mass

2047.37

PI

4.44

Net Charge

-1

Boman Index

3.83

Hydrophobicity

0.189

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0