TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB26007

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 15-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

TWAGVEAIIRILQQL

FASTA

>TPDB26007|Antibacterial;Antiviral|length=15
TWAGVEAIIRILQQL

Formula C79H131N21O21

Absent Amino Acids NDCHKMFPSY

Common Amino Acids I

Mass 1711.04

PI 6.97

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 9

Net Charge -0

Boman Index -0.03

Hydrophobicity 0.793

Aliphatic Index 162.67

Half Life

Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 321.44

Polar Residues 3

number

2

A

1

R

0

N

0

D

0

C

1

E

2

Q

1

G

0

H

3

I

2

L

0

K

0

M

0

F

0

P

0

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 2 G: 1 H: 0 I: 3 L: 2 K: 0 M: 0 F: 0 P: 0 S: 0 T: 1 W: 1 Y: 0 V: 1

Length

15

Formula

C79H131N21O21

Mass

1711.04

PI

6.97

Net Charge

-0

Boman Index

-0.03

Hydrophobicity

0.793

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0