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Peptide record

TPDB25960

Antibacterial standard
22 amino acids
Basic Information
3D PDB MODEL
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TPDB25960
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 22-aa standard natural antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
TPAAAVVTTVISGAAVTTAKSI
Physicochemical Analysis
C89H157N23O30
RNDCEQHLMFWY
A
2029.36
10.10
1
0
12
+1
1.05
1.164
115.45
Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
7
Residue Composition
number
6
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
2
I
0
L
1
K
0
M
0
F
1
P
2
S
5
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 6 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 2 L: 0 K: 1 M: 0 F: 0 P: 1 S: 2 T: 5 W: 0 Y: 0 V: 4
Chemical Descriptors
22
C89H157N23O30
2029.36
10.10
+1
1.05
1.164
Evidence Records 4 records
Evidence 1 Activity

Activity

MIC
Antibacterial
16 µg/mL

Target

v. campestris NCCB92058

Source & Reference

NA

Other

Active against (bacteriostatic) Gram- X. campestris pv. campestris NCCB92058 (MIC 16 ug/ml), X. translucens pv. graminis LMG587 (MIC 4 ug/ml), P. syringae pv. tomato DC3000 (MIC 8 u
Evidence 2 Activity

Activity

MIC
Antibacterial
4 µg/mL

Target

v. graminis LMG587

Source & Reference

NA

Other

teriostatic) Gram- X. campestris pv. campestris NCCB92058 (MIC 16 ug/ml), X. translucens pv. graminis LMG587 (MIC 4 ug/ml), P. syringae pv. tomato DC3000 (MIC 8 ug/ml), bactericidal to Gram+ S. aureus subsp. aure
Evidence 3 Activity

Activity

MIC
Antibacterial
8 µg/mL

Target

v. tomato DC3000

Source & Reference

NA

Other

NCCB92058 (MIC 16 ug/ml), X. translucens pv. graminis LMG587 (MIC 4 ug/ml), P. syringae pv. tomato DC3000 (MIC 8 ug/ml), bactericidal to Gram+ S. aureus subsp. aureus 5334R4, B. cereus ATCC14579 (MIC 8 ug/ml),
Evidence 4 Activity

Activity

MIC
Antibacterial
8 µg/mL

Target

B. cereus ATCC14579

Source & Reference

NA

Other

ae pv. tomato DC3000 (MIC 8 ug/ml), bactericidal to Gram+ S. aureus subsp. aureus 5334R4, B. cereus ATCC14579 (MIC 8 ug/ml), and M. flavus (not pathogenic) (MIC 2 ug/ml). Inactive: R.syzygii subsp. Syzygii LMG6969