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Peptide record

TPDB25891

Antibacterial Antifungal standard
104 amino acids
Basic Information
3D PDB MODEL
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TPDB25891
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 104-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
TDHQMAQSACIGVSQDNAYASAIPRDCHGGKTCEGICADATATMDRYSDTGGPLSTARCVNAFHFYKRRGEENVSYKPFVVSWKYGVAGCFYTHCGPNFCCCIS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C483H725N139O151S12
A
11279.63
6.95
13
9
36
-0
1.58
-0.266
46.06
Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour
15065
1.34
38
Residue Composition
number
11
A
5
R
4
N
6
D
10
C
3
E
3
Q
10
G
4
H
4
I
1
L
4
K
2
M
5
F
4
P
8
S
7
T
1
W
6
Y
6
V
Amino Acid Distribution
A: 11 R: 5 N: 4 D: 6 C: 10 E: 3 Q: 3 G: 10 H: 4 I: 4 L: 1 K: 4 M: 2 F: 5 P: 4 S: 8 T: 7 W: 1 Y: 6 V: 6
Chemical Descriptors
104 reviewed residue count
C483H725N139O151S12 sequence-only estimate (linear, free termini)
11279.63 sequence-only estimate (linear, free termini)
6.95 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.58 sequence-only estimate (linear, free termini)
-0.266 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb