TPDB

3D PDB MODEL

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TPDB ID TPDB25674

Activity

Antibacterial Toxicity

Activity_category_statistics

Anti-infective peptides Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 25-aa modified multi-activity (Antibacterial and Toxicity) peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SLKDKVKSMGEKLKQYIQTWKAKFZ

FASTA

>TPDB25674|Antibacterial;Toxicity|length=25
SLKDKVKSMGEKLKQYIQTWKAKFZ

Formula C133H218N34O35S1

Absent Amino Acids RNCHP

Common Amino Acids K

Mass 2885.46

PI 10.48

Basic Residues 7

Acidic Residues 2

Hydrophobic Residues 9

Net Charge +5

Boman Index 6.07

Hydrophobicity -0.936

Aliphatic Index 62.40

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 242.25

Polar Residues 6

number

1

A

0

R

0

N

1

D

0

C

1

E

2

Q

1

G

0

H

1

I

2

L

7

K

1

M

1

F

0

P

2

S

1

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 1 C: 0 E: 1 Q: 2 G: 1 H: 0 I: 1 L: 2 K: 7 M: 1 F: 1 P: 0 S: 2 T: 1 W: 1 Y: 1 V: 1

Length

25

Formula

C133H218N34O35S1

Mass

2885.46

PI

10.48

Net Charge

+5

Boman Index

6.07

Hydrophobicity

-0.936

Evidence 1 Activity

Source & Reference

Database Source NA