TPDB

3D PDB MODEL

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TPDB ID TPDB25649

Activity

Antibacterial Anticancer Antifungal Antiparasitic

Activity_category_statistics

Anti-infective peptides Cancer-related peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 46-aa standard natural multi-activity (Antibacterial, Anticancer, Antifungal, and other sources) peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

SKLLKSTNFQRLGLSISRKNIKHAYRRNKIKRLIRELDFVVIVNIL

FASTA

>TPDB25649|Antibacterial;Anticancer;Antifungal;Antiparasitic|length=46
SKLLKSTNFQRLGLSISRKNIKHAYRRNKIKRLIRELDFVVIVNIL

Formula C249H429N77O62

Absent Amino Acids CMPW

Common Amino Acids L

Mass 5493.62

PI 12.15

Basic Residues 13

Acidic Residues 2

Hydrophobic Residues 20

Net Charge +10

Boman Index 9.00

Hydrophobicity -0.220

Aliphatic Index 131.30

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 27.12

Polar Residues 11

number

1

A

6

R

4

N

1

D

0

C

1

E

1

Q

1

G

1

H

6

I

7

L

6

K

0

M

2

F

0

P

4

S

1

T

0

W

1

Y

3

V

Amino Acid Distribution

A: 1 R: 6 N: 4 D: 1 C: 0 E: 1 Q: 1 G: 1 H: 1 I: 6 L: 7 K: 6 M: 0 F: 2 P: 0 S: 4 T: 1 W: 0 Y: 1 V: 3

Length

46

Formula

C249H429N77O62

Mass

5493.62

PI

12.15

Net Charge

+10

Boman Index

9.00

Hydrophobicity

-0.220

Evidence 1 Activity

Source & Reference

Database Source NA