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Peptide record

TPDB25609

Antibacterial standard
39 amino acids
Basic Information
3D PDB MODEL
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TPDB25609
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 39-aa standard natural antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
SGTQRKGAYNVKNPNIKDFSHANLCFQPKVCGVKQEWRL
Physicochemical Analysis
C197H310N60O55S2
M
K
4463.12
10.20
8
2
12
+5
8.44
-0.851
57.44
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
7115
159.42
13
Residue Composition
number
2
A
2
R
4
N
1
D
2
C
1
E
3
Q
3
G
1
H
1
I
2
L
5
K
0
M
2
F
2
P
2
S
1
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 2 N: 4 D: 1 C: 2 E: 1 Q: 3 G: 3 H: 1 I: 1 L: 2 K: 5 M: 0 F: 2 P: 2 S: 2 T: 1 W: 1 Y: 1 V: 3
Chemical Descriptors
39
C197H310N60O55S2
4463.12
10.20
+5
8.44
-0.851
Evidence Records 1 records
Evidence 1 Activity

Activity

Antibacterial

Source & Reference

NA

Other

Inhibited the growth of S-aureus (relative OD drop by 0%), B. subtilis (36%), E. coli (24%), and P-aeruginosa (0%) at 60 uM. Sequence provided by Dr. Jun Wang.