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Peptide record

TPDB25600

Antibacterial Antifungal standard
35 amino acids
Basic Information
3D PDB MODEL
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TPDB25600
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 35-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
SGPNGQCGPGWGGCRGGLCCSQYGYCGSGPKYCAH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C143H207N45O45S6
DEIMFTV
G
3468.85
8.02
3
0
6
+2
0.75
-0.511
14.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
10345
2.98
15
Residue Composition
number
1
A
1
R
1
N
0
D
6
C
0
E
2
Q
11
G
1
H
0
I
1
L
1
K
0
M
0
F
3
P
3
S
0
T
1
W
3
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 6 E: 0 Q: 2 G: 11 H: 1 I: 0 L: 1 K: 1 M: 0 F: 0 P: 3 S: 3 T: 0 W: 1 Y: 3 V: 0
Chemical Descriptors
35 reviewed residue count
C143H207N45O45S6 sequence-only estimate (linear, free termini)
3468.85 sequence-only estimate (linear, free termini)
8.02 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.75 sequence-only estimate (linear, free termini)
-0.511 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb