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Peptide record

TPDB25598

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB25598
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
SGPGRRSSRRRK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C54H102N28O16
ANDCEQHILMFTWYV
R
1399.58
13.00
6
0
0
+6
7.37
-2.600
0.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
0
A
5
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
0
I
0
L
1
K
0
M
0
F
1
P
3
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 0 K: 1 M: 0 F: 0 P: 1 S: 3 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
12 reviewed residue count
C54H102N28O16 sequence-only estimate (linear, free termini)
1399.58 sequence-only estimate (linear, free termini)
13.00 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
7.37 sequence-only estimate (linear, free termini)
-2.600 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb