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Peptide record

TPDB25550

Antibacterial Antifungal standard
33 amino acids
Basic Information
3D PDB MODEL
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TPDB25550
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 33-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
SCQDCYEALHKCMASHSKPFSCSMKFHMCLQQQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C160H246N46O48S8
RNGITWV
CS
3838.47
7.75
6
2
10
+1
1.59
-0.430
29.70
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1740
0.45
15
Residue Composition
number
2
A
0
R
0
N
1
D
5
C
1
E
4
Q
0
G
3
H
0
I
2
L
3
K
3
M
2
F
1
P
5
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 1 C: 5 E: 1 Q: 4 G: 0 H: 3 I: 0 L: 2 K: 3 M: 3 F: 2 P: 1 S: 5 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
33 reviewed residue count
C160H246N46O48S8 sequence-only estimate (linear, free termini)
3838.47 sequence-only estimate (linear, free termini)
7.75 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.59 sequence-only estimate (linear, free termini)
-0.430 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb