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Peptide record

TPDB25504

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB25504
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RYCYAMWIPYPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C74H100N16O16S3
NDEQGHLKFSTV
Y
1565.89
8.26
1
0
7
+1
0.11
0.058
40.83
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
10095
6.45
5
Residue Composition
number
1
A
1
R
0
N
0
D
2
C
0
E
0
Q
0
G
0
H
1
I
0
L
0
K
1
M
0
F
2
P
0
S
0
T
1
W
3
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 0 M: 1 F: 0 P: 2 S: 0 T: 0 W: 1 Y: 3 V: 0
Chemical Descriptors
12 reviewed residue count
C74H100N16O16S3 sequence-only estimate (linear, free termini)
1565.89 sequence-only estimate (linear, free termini)
8.26 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.11 sequence-only estimate (linear, free termini)
0.058 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb