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Peptide record

TPDB25421

Antibacterial Antifungal standard
34 amino acids
Basic Information
3D PDB MODEL
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TPDB25421
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 34-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RWKVFKKIEKVGRNIRDGVIKAAPAIEVLGQAKA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C173H294N52O43
CHMSTY
K
3790.56
11.14
9
3
16
+6
1.61
-0.226
106.18
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5500
1.45
2
Residue Composition
number
5
A
3
R
1
N
1
D
0
C
2
E
1
Q
3
G
0
H
4
I
1
L
6
K
0
M
1
F
1
P
0
S
0
T
1
W
0
Y
4
V
Amino Acid Distribution
A: 5 R: 3 N: 1 D: 1 C: 0 E: 2 Q: 1 G: 3 H: 0 I: 4 L: 1 K: 6 M: 0 F: 1 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 4
Chemical Descriptors
34 reviewed residue count
C173H294N52O43 sequence-only estimate (linear, free termini)
3790.56 sequence-only estimate (linear, free termini)
11.14 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.61 sequence-only estimate (linear, free termini)
-0.226 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb