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Peptide record

TPDB25381

Antibacterial Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
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TPDB25381
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 40-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RVQGRWKVRASFFKGGGGSVCVYRGFAWNCHRRANNGVRV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C200H309N71O48S2
DEILMPT
RG
4540.22
12.29
10
0
15
+9
2.50
-0.500
51.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
12615
2.78
9
Residue Composition
number
3
A
7
R
3
N
0
D
2
C
0
E
1
Q
7
G
1
H
0
I
0
L
2
K
0
M
3
F
0
P
2
S
0
T
2
W
1
Y
6
V
Amino Acid Distribution
A: 3 R: 7 N: 3 D: 0 C: 2 E: 0 Q: 1 G: 7 H: 1 I: 0 L: 0 K: 2 M: 0 F: 3 P: 0 S: 2 T: 0 W: 2 Y: 1 V: 6
Chemical Descriptors
40 reviewed residue count
C200H309N71O48S2 sequence-only estimate (linear, free termini)
4540.22 sequence-only estimate (linear, free termini)
12.29 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
2.50 sequence-only estimate (linear, free termini)
-0.500 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb