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Peptide record

TPDB25380

Antibacterial Antifungal standard
45 amino acids
Basic Information
3D PDB MODEL
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TPDB25380
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 45-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RVQGRWKVRASFFKEAAAKEAAAKVCVYRGFAWNCHRRANNGVRV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C229H360N78O56S2
DILMPT
A
5165.99
11.74
12
2
21
+9
2.54
-0.480
58.67
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
12615
2.44
8
Residue Composition
number
9
A
7
R
3
N
0
D
2
C
2
E
1
Q
3
G
1
H
0
I
0
L
4
K
0
M
3
F
0
P
1
S
0
T
2
W
1
Y
6
V
Amino Acid Distribution
A: 9 R: 7 N: 3 D: 0 C: 2 E: 2 Q: 1 G: 3 H: 1 I: 0 L: 0 K: 4 M: 0 F: 3 P: 0 S: 1 T: 0 W: 2 Y: 1 V: 6
Chemical Descriptors
45 reviewed residue count
C229H360N78O56S2 sequence-only estimate (linear, free termini)
5165.99 sequence-only estimate (linear, free termini)
11.74 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
2.54 sequence-only estimate (linear, free termini)
-0.480 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb