TPDB

3D PDB MODEL

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TPDB ID TPDB25310

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 19-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

RQMRAWGQDYQHGGMGYSC

FASTA

>TPDB25310|Antibacterial;Antiviral|length=19
RQMRAWGQDYQHGGMGYSC

Formula C93H135N31O28S3

Absent Amino Acids NEILKFPTV

Common Amino Acids G

Mass 2231.47

PI 8.84

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 6

Net Charge +1

Boman Index 1.12

Hydrophobicity -1.263

Aliphatic Index 5.26

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 8480

Absorbance 280nm 380.02

Polar Residues 7

number

1

A

2

R

0

N

1

D

1

C

0

E

3

Q

4

G

1

H

0

I

0

L

0

K

2

M

0

F

0

P

1

S

0

T

1

W

2

Y

0

V

Amino Acid Distribution

A: 1 R: 2 N: 0 D: 1 C: 1 E: 0 Q: 3 G: 4 H: 1 I: 0 L: 0 K: 0 M: 2 F: 0 P: 0 S: 1 T: 0 W: 1 Y: 2 V: 0

Length

19

Formula

C93H135N31O28S3

Mass

2231.47

PI

8.84

Net Charge

+1

Boman Index

1.12

Hydrophobicity

-1.263

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0