TPDB

3D PDB MODEL

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TPDB ID TPDB25289

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 24-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

RSQKEGLHYTCSSHFPYSQYQFWK

FASTA

>TPDB25289|Antibacterial;Antiviral|length=24
RSQKEGLHYTCSSHFPYSQYQFWK

Formula C138H191N37O38S1

Absent Amino Acids ANDIMV

Common Amino Acids S

Mass 3008.32

PI 9.43

Basic Residues 5

Acidic Residues 1

Hydrophobic Residues 7

Net Charge +2

Boman Index 1.86

Hydrophobicity -1.312

Aliphatic Index 16.25

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 9970

Absorbance 280nm 331.41

Polar Residues 12

number

0

A

1

R

0

N

0

D

1

C

1

E

3

Q

1

G

2

H

0

I

1

L

2

K

0

M

2

F

1

P

4

S

1

T

1

W

3

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 0 C: 1 E: 1 Q: 3 G: 1 H: 2 I: 0 L: 1 K: 2 M: 0 F: 2 P: 1 S: 4 T: 1 W: 1 Y: 3 V: 0

Length

24

Formula

C138H191N37O38S1

Mass

3008.32

PI

9.43

Net Charge

+2

Boman Index

1.86

Hydrophobicity

-1.312

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0