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Peptide record

TPDB25277

Antibacterial Anticancer Antifungal standard
47 amino acids
Basic Information
3D PDB MODEL
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TPDB25277
Antibacterial Anticancer Antifungal
Anti-infective peptides Cancer-related peptides
Peptipedia CAFPdb dbAMP
standard
No
A 47-aa standard-residue multi-activity (Antibacterial, Anticancer, and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
RTCESQSHRFKGPCARDSNCATVCLTEGFSGGDCRGFRRRCFCTRPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C212H338N76O66S8
IMWY
RC
5263.97
8.53
10
4
8
+5
3.35
-0.691
18.72
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
500
0.09
18
Residue Composition
number
2
A
8
R
1
N
2
D
8
C
2
E
1
Q
5
G
1
H
0
I
1
L
1
K
0
M
4
F
2
P
4
S
4
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 8 N: 1 D: 2 C: 8 E: 2 Q: 1 G: 5 H: 1 I: 0 L: 1 K: 1 M: 0 F: 4 P: 2 S: 4 T: 4 W: 0 Y: 0 V: 1
Chemical Descriptors
47 reviewed residue count
C212H338N76O66S8 sequence-only estimate (linear, free termini)
5263.97 sequence-only estimate (linear, free termini)
8.53 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.35 sequence-only estimate (linear, free termini)
-0.691 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb