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Peptide record

TPDB25101

Antibacterial Antifungal standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB25101
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 9-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RQWRRWWQR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C67H96N26O12
ANDCEGHILKMFPSTYV
R
1457.67
12.88
4
0
3
+4
7.09
-3.078
0.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
16500
11.32
2
Residue Composition
number
0
A
4
R
0
N
0
D
0
C
0
E
2
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 3 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C67H96N26O12 sequence-only estimate (linear, free termini)
1457.67 sequence-only estimate (linear, free termini)
12.88 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
7.09 sequence-only estimate (linear, free termini)
-3.078 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb