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Peptide record

TPDB25067

Antibacterial Antifungal standard
66 amino acids
Basic Information
3D PDB MODEL
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TPDB25067
Antibacterial Antifungal
Anti-infective peptides
Peptipedia Antifungipept
standard
No
A 66-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and Antifungipept, with an available 3D structural model.
Sequence
RRGKDSGGPKMGRKDSKGCWRGRPGSGSRPGFGSGIAGASGVNHVGTLPASNSTTHPLDNCKISPQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C278H454N98O89S3
EY
G
6689.45
11.41
13
3
12
+8
2.42
-0.950
36.97
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5625
0.84
18
Residue Composition
number
3
A
6
R
3
N
3
D
2
C
0
E
1
Q
14
G
2
H
2
I
2
L
5
K
1
M
1
F
6
P
9
S
3
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 3 R: 6 N: 3 D: 3 C: 2 E: 0 Q: 1 G: 14 H: 2 I: 2 L: 2 K: 5 M: 1 F: 1 P: 6 S: 9 T: 3 W: 1 Y: 0 V: 2
Chemical Descriptors
66 reviewed residue count
C278H454N98O89S3 sequence-only estimate (linear, free termini)
6689.45 sequence-only estimate (linear, free termini)
11.41 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
2.42 sequence-only estimate (linear, free termini)
-0.950 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

Antifungipept