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Peptide record

TPDB25057

Antibacterial Antifungal standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB25057
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 11-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
RQIRRWWQWRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H119N31O14
ANDCEGHLKMFPSTYV
R
1727.01
13.00
5
0
4
+5
6.71
-2.518
35.45
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
16500
9.55
2
Residue Composition
number
0
A
5
R
0
N
0
D
0
C
0
E
2
Q
0
G
0
H
1
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 3 Y: 0 V: 0
Chemical Descriptors
11 reviewed residue count
C79H119N31O14 sequence-only estimate (linear, free termini)
1727.01 sequence-only estimate (linear, free termini)
13.00 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
6.71 sequence-only estimate (linear, free termini)
-2.518 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb