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Peptide record

TPDB24985

Antibacterial Antifungal standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB24985
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 15-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
RLNTTFRPLNFKMLR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C86H143N27O20S1
ADCEQGHISWYV
RL
1907.31
12.71
4
0
6
+4
3.04
-0.567
78.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
4
Residue Composition
number
0
A
3
R
2
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
3
L
1
K
1
M
2
F
1
P
0
S
2
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 2 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 3 K: 1 M: 1 F: 2 P: 1 S: 0 T: 2 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C86H143N27O20S1 sequence-only estimate (linear, free termini)
1907.31 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.04 sequence-only estimate (linear, free termini)
-0.567 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb