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Peptide record

TPDB24934

Antibacterial Antifungal standard
7 amino acids
Basic Information
3D PDB MODEL
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TPDB24934
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 7-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
RKRRKKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C42H86N20O8
ANDCEQGHILMFPSTWYV
K
999.27
12.72
7
0
0
+7
9.57
-4.157
0.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
3
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
4
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 4 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
7 reviewed residue count
C42H86N20O8 sequence-only estimate (linear, free termini)
999.27 sequence-only estimate (linear, free termini)
12.72 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
9.57 sequence-only estimate (linear, free termini)
-4.157 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb