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Peptide record

TPDB24678

Antibacterial Antifungal standard
47 amino acids
Basic Information
3D PDB MODEL
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TPDB24678
Antibacterial Antifungal
Anti-infective peptides
Peptipedia AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP
standard
No
A 47-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, AFP-GFuse, Antifungipept, and other sources, with an available 3D structural model.
Sequence
RECQSQSHRYKGACVHDTNCASVCQTEGFSGGKCVGFRGRCFCTKAC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C207H326N70O66S8
ILMPW
C
5107.78
8.32
9
3
10
+4
2.35
-0.494
24.89
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
1990
0.39
20
Residue Composition
number
3
A
4
R
1
N
1
D
8
C
2
E
3
Q
6
G
2
H
0
I
0
L
3
K
0
M
3
F
0
P
4
S
3
T
0
W
1
Y
3
V
Amino Acid Distribution
A: 3 R: 4 N: 1 D: 1 C: 8 E: 2 Q: 3 G: 6 H: 2 I: 0 L: 0 K: 3 M: 0 F: 3 P: 0 S: 4 T: 3 W: 0 Y: 1 V: 3
Chemical Descriptors
47 reviewed residue count
C207H326N70O66S8 sequence-only estimate (linear, free termini)
5107.78 sequence-only estimate (linear, free termini)
8.32 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.35 sequence-only estimate (linear, free termini)
-0.494 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept