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Peptide record

TPDB24586

Antibacterial Antifungal standard
26 amino acids
Basic Information
3D PDB MODEL
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TPDB24586
Antibacterial Antifungal
Anti-infective peptides
Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 26-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, Antifungipept, CAFPdb, and other sources, with an available 3D structural model.
Sequence
RAPAEDLARYYSALRHYINLITRQRY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C144H225N45O39
CGKMFWV
R
3210.65
10.17
6
2
13
+3
3.14
-0.785
90.38
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
5960
1.86
8
Residue Composition
number
4
A
5
R
1
N
1
D
0
C
1
E
1
Q
0
G
1
H
2
I
3
L
0
K
0
M
0
F
1
P
1
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 4 R: 5 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 2 L: 3 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
26 reviewed residue count
C144H225N45O39 sequence-only estimate (linear, free termini)
3210.65 sequence-only estimate (linear, free termini)
10.17 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.14 sequence-only estimate (linear, free termini)
-0.785 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept