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Peptide record

TPDB24432

Antibacterial Antifungal standard
77 amino acids
Basic Information
3D PDB MODEL
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TPDB24432
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 77-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
QHGYGAGGHGQQGYGSQHSSHAPQGGHVVREQGFSGHVHEQQAGHHHEAGHHEQAGHHEQSGQQVHGQGHGYKSHGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C345H484N128O111
NDCILMTW
G
8200.43
6.67
19
5
14
-1
2.35
-1.512
21.56
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
5960
0.73
23
Residue Composition
number
5
A
1
R
0
N
0
D
0
C
5
E
13
Q
19
G
17
H
0
I
0
L
1
K
0
M
1
F
1
P
6
S
0
T
0
W
4
Y
4
V
Amino Acid Distribution
A: 5 R: 1 N: 0 D: 0 C: 0 E: 5 Q: 13 G: 19 H: 17 I: 0 L: 0 K: 1 M: 0 F: 1 P: 1 S: 6 T: 0 W: 0 Y: 4 V: 4
Chemical Descriptors
77 reviewed residue count
C345H484N128O111 sequence-only estimate (linear, free termini)
8200.43 sequence-only estimate (linear, free termini)
6.67 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
2.35 sequence-only estimate (linear, free termini)
-1.512 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb