TPDB

3D PDB MODEL

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TPDB ID TPDB24301

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

PITHWSHGQNRWPLSCPQ

FASTA

>TPDB24301|Antibacterial;Antiviral|length=18
PITHWSHGQNRWPLSCPQ

Formula C96H138N30O25S1

Absent Amino Acids ADEKMFYV

Common Amino Acids P

Mass 2144.40

PI 9.01

Basic Residues 3

Acidic Residues 0

Hydrophobic Residues 4

Net Charge +1

Boman Index 1.26

Hydrophobicity -1.106

Aliphatic Index 43.33

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 11000

Absorbance 280nm 512.96

Polar Residues 7

number

0

A

1

R

1

N

0

D

1

C

0

E

2

Q

1

G

2

H

1

I

1

L

0

K

0

M

0

F

3

P

2

S

1

T

2

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 1 D: 0 C: 1 E: 0 Q: 2 G: 1 H: 2 I: 1 L: 1 K: 0 M: 0 F: 0 P: 3 S: 2 T: 1 W: 2 Y: 0 V: 0

Length

18

Formula

C96H138N30O25S1

Mass

2144.40

PI

9.01

Net Charge

+1

Boman Index

1.26

Hydrophobicity

-1.106

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0