TPDB

3D PDB MODEL

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TPDB ID TPDB24265

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 15-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

PGIWQLDCTHLEGKI

FASTA

>TPDB24265|Antibacterial;Antiviral|length=15
PGIWQLDCTHLEGKI

Formula C77H120N20O22S1

Absent Amino Acids ARNMFSYV

Common Amino Acids GIL

Mass 1709.98

PI 5.21

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 5

Net Charge -1

Boman Index 2.56

Hydrophobicity -0.167

Aliphatic Index 104.00

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 5500

Absorbance 280nm 321.64

Polar Residues 3

number

0

A

0

R

0

N

1

D

1

C

1

E

1

Q

2

G

1

H

2

I

2

L

1

K

0

M

0

F

1

P

0

S

1

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 1 C: 1 E: 1 Q: 1 G: 2 H: 1 I: 2 L: 2 K: 1 M: 0 F: 0 P: 1 S: 0 T: 1 W: 1 Y: 0 V: 0

Length

15

Formula

C77H120N20O22S1

Mass

1709.98

PI

5.21

Net Charge

-1

Boman Index

2.56

Hydrophobicity

-0.167

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0