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Peptide record

TPDB24226

Antibacterial Antifungal standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB24226
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 13-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
NYIFPRIRTCYYL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C82H120N20O19S1
ADEQGHKMSWV
Y
1722.04
9.52
2
0
7
+2
1.57
-0.046
90.00
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
4470
2.60
6
Residue Composition
number
0
A
2
R
1
N
0
D
1
C
0
E
0
Q
0
G
0
H
2
I
1
L
0
K
0
M
1
F
1
P
0
S
1
T
0
W
3
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 1 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 1 K: 0 M: 0 F: 1 P: 1 S: 0 T: 1 W: 0 Y: 3 V: 0
Chemical Descriptors
13 reviewed residue count
C82H120N20O19S1 sequence-only estimate (linear, free termini)
1722.04 sequence-only estimate (linear, free termini)
9.52 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.57 sequence-only estimate (linear, free termini)
-0.046 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb