TPDB

3D PDB MODEL

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TPDB ID TPDB24015

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 19-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

MVDRGWGNHAGLFGKGSIV

FASTA

>TPDB24015|Antibacterial;Antiviral|length=19
MVDRGWGNHAGLFGKGSIV

Formula C89H137N27O24S1

Absent Amino Acids CEQPTY

Common Amino Acids G

Mass 2001.29

PI 10.09

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 8

Net Charge +1

Boman Index 0.48

Hydrophobicity 0.047

Aliphatic Index 76.84

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 274.82

Polar Residues 2

number

1

A

1

R

1

N

1

D

0

C

0

E

0

Q

5

G

1

H

1

I

1

L

1

K

1

M

1

F

0

P

1

S

0

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 5 H: 1 I: 1 L: 1 K: 1 M: 1 F: 1 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 2

Length

19

Formula

C89H137N27O24S1

Mass

2001.29

PI

10.09

Net Charge

+1

Boman Index

0.48

Hydrophobicity

0.047

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0