TPDB

3D PDB MODEL

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TPDB ID TPDB24005

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 38-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

MTWMAWDRAIANYAALIHALIEAAQNQQEKNEAALLEL

FASTA

>TPDB24005|Antibacterial;Antiviral|length=38
MTWMAWDRAIANYAALIHALIEAAQNQQEKNEAALLEL

Formula C192H300N52O57S2

Absent Amino Acids CGFPSV

Common Amino Acids A

Mass 4312.93

PI 4.35

Basic Residues 3

Acidic Residues 5

Hydrophobic Residues 23

Net Charge -3

Boman Index 4.68

Hydrophobicity 0.011

Aliphatic Index 108.42

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 289.59

Polar Residues 8

number

10

A

1

R

3

N

1

D

0

C

4

E

3

Q

0

G

1

H

3

I

5

L

1

K

2

M

0

F

0

P

0

S

1

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 10 R: 1 N: 3 D: 1 C: 0 E: 4 Q: 3 G: 0 H: 1 I: 3 L: 5 K: 1 M: 2 F: 0 P: 0 S: 0 T: 1 W: 2 Y: 1 V: 0

Length

38

Formula

C192H300N52O57S2

Mass

4312.93

PI

4.35

Net Charge

-3

Boman Index

4.68

Hydrophobicity

0.011

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0