TPDB

3D PDB MODEL

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TPDB ID TPDB24000

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 36-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.

Sequence

MTWEEWDKKIEEYTKKIEELIKKSEEQQKKNEKELK

FASTA

>TPDB24000|Antibacterial;Antiviral|length=36
MTWEEWDKKIEEYTKKIEELIKKSEEQQKKNEKELK

Formula C205H331N51O66S1

Absent Amino Acids ARCGHFPV

Common Amino Acids EK

Mass 4598.25

PI 5.23

Basic Residues 10

Acidic Residues 11

Hydrophobic Residues 9

Net Charge -1

Boman Index 26.40

Hydrophobicity -1.953

Aliphatic Index 54.17

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 271.63

Polar Residues 7

number

0

A

0

R

1

N

1

D

0

C

10

E

2

Q

0

G

0

H

3

I

2

L

10

K

1

M

0

F

0

P

1

S

2

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 1 C: 0 E: 10 Q: 2 G: 0 H: 0 I: 3 L: 2 K: 10 M: 1 F: 0 P: 0 S: 1 T: 2 W: 2 Y: 1 V: 0

Length

36

Formula

C205H331N51O66S1

Mass

4598.25

PI

5.23

Net Charge

-1

Boman Index

26.40

Hydrophobicity

-1.953

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0