TPDB

3D PDB MODEL

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TPDB ID TPDB23351

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 24-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.

Sequence

MANAGLQLLGFILAFLGWIGAIVS

FASTA

>TPDB23351|Antibacterial;Antiviral|length=24
MANAGLQLLGFILAFLGWIGAIVS

Formula C119H187N27O28S1

Absent Amino Acids RDCEHKPTY

Common Amino Acids L

Mass 2476.02

PI 6.02

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 17

Net Charge -0

Boman Index -7.51

Hydrophobicity 1.713

Aliphatic Index 158.75

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 222.13

Polar Residues 3

number

4

A

0

R

1

N

0

D

0

C

0

E

1

Q

4

G

0

H

3

I

5

L

0

K

1

M

2

F

0

P

1

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 4 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 4 H: 0 I: 3 L: 5 K: 0 M: 1 F: 2 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 1

Length

24

Formula

C119H187N27O28S1

Mass

2476.02

PI

6.02

Net Charge

-0

Boman Index

-7.51

Hydrophobicity

1.713

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0