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Peptide record

TPDB23213

Antibacterial Antifungal standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB23213
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 16-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
LWKIGKKIWRVGWNWR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C105H156N30O18
ADCEQHMFPSTY
W
2126.58
12.43
5
0
8
+5
1.45
-0.725
91.25
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
22000
10.35
1
Residue Composition
number
0
A
2
R
1
N
0
D
0
C
0
E
0
Q
2
G
0
H
2
I
1
L
3
K
0
M
0
F
0
P
0
S
0
T
4
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 2 L: 1 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 4 Y: 0 V: 1
Chemical Descriptors
16 reviewed residue count
C105H156N30O18 sequence-only estimate (linear, free termini)
2126.58 sequence-only estimate (linear, free termini)
12.43 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.45 sequence-only estimate (linear, free termini)
-0.725 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb